Unsupervised and supervised AI on molecular dynamics simulations reveals complex characteristics of HLA-A2-peptide immunogenicity
- 2024
- Briefings in Bioinformatics
Publications
60 results for Tien Huynh
Molecular basis of differential HLA class I-restricted T cell recognition of a highly networked HIV peptide
- Xiaolong Li
- Nishant Kumar Singh
- et al.
- 2023
- Nature Communications
On the Choice of Active Site Sequences for Kinase-Ligand Affinity Prediction
- Jannis Born
- Yoel Shoshan
- et al.
- 2022
- J. Chem. Inf. Model.
Active Site Sequence Representations of Human Kinases Outperform Full Sequence Representations for Affinity Prediction and Inhibitor Generation: 3D Effects in a 1D Model
- Jannis Born
- Tien Huynh
- et al.
- 2021
- J. Chem. Inf. Model.
Crystal-structures-guided design of fragment-based drugs for inhibiting the main protease of SARS-CoV-2
- Binquan Luan
- Tien Huynh
- 2021
- Proteins
Structure-Function Analysis of Resistance to Bamlanivimab by SARS-CoV-2 Variants Kappa, Delta, and Lambda
- Shufeng Liu
- Tien Huynh
- et al.
- 2021
- J. Chem. Inf. Model.
Insights into SARS-CoV-2's Mutations for Evading Human Antibodies: Sacrifice and Survival
- Binquan Luan
- Tien Huynh
- 2021
- Journal of Medicinal Chemistry
Enhanced binding of the N501Y-mutated SARS-CoV-2 spike protein to the human ACE2 receptor: insights from molecular dynamics simulations
- Binquan Luan
- Haoran Wang
- et al.
- 2021
- FEBS Letters
In silico Exploration of Inhibitors for SARS-CoV-2's Papain-Like Protease
- Tien Huynh
- Wendy D. Cornell
- et al.
- 2021
- Frontiers in Chemistry
Proteasome activity regulated by charged gold nanoclusters: Implications for neurodegenerative diseases
- Xiaochuan Ma
- Sangyun Lee
- et al.
- 2020
- Nano Today