De novo virulence feature discovery and risk assessment in Klebsiella pneumoniae based on microbial genome vectorization
- Kristen L. Beck
- Akshay Agarwal
- et al.
- 2025
- Communications Biology
Paper
Publications
62 results for James H. Kaufman
ggMOB: Elucidation of genomic conjugative features and associated cargo genes across bacterial genera using genus-genus mobilization networks
- Gowri Nayar
- Ignacio Terrizzano
- et al.
- 2022
- Frontiers in Genetics
PaperPredicting Epitope Candidates for SARS-CoV-2
- Akshay Agarwal
- Kristen L. Beck
- et al.
- 2022
- Viruses
PaperFunctional Genomics Platform, A Cloud-Based Platform for Studying Microbial Life at Scale
- Edward E. Seabolt
- Gowri Nayar
- et al.
- 2021
- IEEE/ACM TCBB
PaperSemi-supervised pipeline for autonomous annotation of sars-cov-2 genomes
- Kristen L. Beck
- Edward Seabolt
- et al.
- 2021
- Viruses
PaperGlobally local: Hyper-local modeling for accurate forecast of COVID-19
- Vishrawas Gopalakrishnan
- Sayali Pethe
- et al.
- 2021
- Epidemics
PaperA comparative analysis of two unrelated outbreaks in Latvia and Australia of acquired idiopathic megaesophagus in dogs fed two brands of commercial dry dog foods: 398 cases (2014-2018)
- Karyl J. Hurley
- Caroline Mansfield
- et al.
- 2021
- JAVMA
ReviewErratum for Miller et al., “Phylogenetic and Biogeographic Patterns of Vibrio parahaemolyticus Strains from North America Inferred from Whole-Genome Sequence Data”
- John J. Miller
- Bart C. Weimer
- et al.
- 2021
- AEM
PaperAnalysis and forecasting of global real time RT-PCR primers and probes for SARS-CoV-2
- Gowri Nayar
- Edward Seabolt
- et al.
- 2021
- Scientific Reports
PaperMonitoring the microbiome for food safety and quality using deep shotgun sequencing
- Kristen L. Beck
- Niina Haiminen
- et al.
- 2021
- npj Science of Food
Paper