Publications

9 results for Ken A. Dill

Accelerating physical simulations of proteins by leveraging external knowledge
- - Alberto Perez
  - Joseph A. Morrone
  - et al.
- 2017
- WIREs Computational Molecular Science
Review
Molecular Simulations Identify Binding Poses and Approximate Affinities of Stapled α-Helical Peptides to MDM2 and MDMX
- - Joseph A. Morrone
  - Alberto Perez
  - et al.
- 2017
- JCTC
Paper
Computed Binding of Peptides to Proteins with MELD-Accelerated Molecular Dynamics
- - Joseph A. Morrone
  - Alberto Perez
  - et al.
- 2017
- JCTC
Paper
Blind protein structure prediction using accelerated free-energy simulations
- - Alberto Perez
  - Joseph A. Morrone
  - et al.
- 2016
- Science Advances
Paper
Even with nonnative interactions, the updated folding transition states of the homologs Proteins G & L are extensive and similar
- - Michael C. Baxa
  - Wookyung Yu
  - et al.
- 2015
- PNAS
Paper
Automatic discovery of metastable states for the construction of Markov models of macromolecular conformational dynamics
- - John D. Chodera
  - Nina Singhal
  - et al.
- 2007
- Journal of Chemical Physics
Paper
Long-time protein folding dynamics from short-time molecular dynamics simulations
- - John D. Chodera
  - William C. Swope
  - et al.
- 2006
- Multiscale Modeling and Simulation
Paper
Use of the weighted histogram analysis method for the analysis of simulated and parallel tempering simulations
- - John D. Chodera
  - William C. Swope
  - et al.
- 2006
- JCTC
Paper
The Interphase in Lamellar Semicrystalline Polymers
- - Paul J. Flory
  - Do Y. Yoon
  - et al.
- 2002
- Macromolecules
Paper