Ella Barkan, Ibrahim Siddiqui, et al.
Computational And Structural Biotechnology Journal
Machine learning (ML) models of drug sensitivity prediction are becoming increasingly popular in precision oncology. Here, we identify a fundamental limitation in standard measures of drug sensitivity that hinders the development of personalized prediction models – they focus on absolute effects but do not capture relative differences between cancer subtypes. Our work suggests that using z-scored drug response measures mitigates these limitations and leads to meaningful predictions, opening the door for sophisticated ML precision oncology models.
Ella Barkan, Ibrahim Siddiqui, et al.
Computational And Structural Biotechnology Journal
Lazar Valkov, Akash Srivastava, et al.
ICLR 2024
Yidi Wu, Thomas Bohnstingl, et al.
ICML 2025
Pengfei He, Han Xu, et al.
ICLR 2024